P. E. Joubert, P. Gregoire, and I. , Autophagie et pathogènes : « Bon appétit Messieurs !, Med Sci (Paris), vol.27, pp.41-48, 2011.
DOI : 10.1051/medsci/201127141

URL : https://www.medecinesciences.org/articles/medsci/pdf/2011/01/medsci2011271p41.pdf

P. Verlhac, I. P. Gregoire, and O. Azocar, Autophagy receptor NDP52 regulates pathogen-containing autophagosome maturation, Cell Host Microbe, vol.17, pp.515-540, 2015.
DOI : 10.1016/j.chom.2015.02.008

URL : https://hal.archives-ouvertes.fr/hal-01157772

M. T. Sorbara and S. E. Girardin, Emerging themes in bacterial autophagy, Curr Opin Microbiol, vol.23, pp.163-70, 2015.
DOI : 10.1016/j.mib.2014.11.020

L. H. Travassos, L. A. Carneiro, and M. Ramjeet, Nod1 and Nod2 direct autophagy by recruiting ATG16L1 to the plasma membrane at the site of bacterial entry, Nat Immunol, vol.11, pp.55-62, 2010.

T. L. Thurston, M. P. Wandel, and N. Von-muhlinen, Galectin 8 targets damaged vesicles for autophagy to defend cells against bacterial invasion, Nature, vol.482, pp.414-422, 2012.
DOI : 10.1038/nature10744

URL : http://europepmc.org/articles/pmc3343631?pdf=render

P. Lapaquette, J. Guzzo, L. Bretillon, and M. A. Bringer, Cellular and molecular connections between autophagy and inflammation, Mediators Inflamm, p.398483, 2015.
DOI : 10.1155/2015/398483

URL : https://hal.archives-ouvertes.fr/hal-01207466

I. Tattoli, M. T. Sorbara, and D. Vuckovic, Amino acid starvation induced by invasive bacterial pathogens triggers an innate host defense program, Cell Host Microbe, vol.11, pp.563-75, 2012.
DOI : 10.1016/j.chom.2012.04.012

URL : https://doi.org/10.1016/j.chom.2012.04.012

T. Saitoh, N. Fujita, and M. H. Jang, Loss of the autophagy protein Atg16L1 enhances endotoxin-induced IL-1beta production, Nature, vol.456, pp.264-272, 2008.

K. Nakahira, J. A. Haspel, and V. A. Rathinam, Autophagy proteins regulate innate immune responses by inhibiting the release of mitochondrial DNA mediated by the NALP3 inflammasome, Nat Immunol, vol.12, pp.222-252, 2011.

S. Y. Chuang, C. H. Yang, and C. C. Chou, TLR-induced PAI-2 expression suppresses IL-1beta processing via increasing autophagy and NLRP3 degradation, Proc Natl Acad Sci, vol.110, pp.16079-84, 2013.
DOI : 10.1073/pnas.1306556110

URL : http://europepmc.org/articles/pmc3791747?pdf=render

C. S. Shi, K. Shenderov, and N. N. Huang, Activation of autophagy by inflammatory signals limits IL-1beta production by targeting ubiquitinated inflammasomes for destruction, Nat Immunol, vol.13, pp.255-63, 2012.

T. Suzuki, L. Franchi, and C. Toma, Differential regulation of caspase-1 activation, pyroptosis, and autophagy via Ipaf and ASC in Shigella-infected macrophages, PLoS Pathog, vol.3, p.111, 2007.

M. Wlodarska, C. A. Thaiss, and R. Nowarski, NLRP6 inflammasome orchestrates the colonic hostmicrobial interface by regulating goblet cell mucus secretion, Cell, vol.156, pp.1045-59, 2014.

D. Zhou, K. H. Kang, and S. A. Spector, Production of interferon alpha by human immunodeficiency virus type 1 in human plasmacytoid dendritic cells is dependent on induction of autophagy, J Infect dis, vol.205, pp.1258-67, 2012.

M. C. Tal, M. Sasai, and H. K. Lee, Absence of autophagy results in reactive oxygen species-dependent amplification of RLR signaling, Proc Natl Acad Sci, vol.106, pp.2770-2775, 2009.

N. Jounai, F. Takeshita, and K. Kobiyama, The Atg5 Atg12 conjugate associates with innate antiviral immune responses, Proc Natl Acad Sci, vol.104, pp.14050-14055, 2007.

T. Saitoh, N. Fujita, and T. Hayashi, Atg9a controls dsDNA-driven dynamic translocation of STING and the innate immune response, Proc Natl Acad Sci, vol.106, pp.20842-20848, 2009.

Q. Liang, G. J. Seo, and Y. J. Choi, Crosstalk between the cGAS DNA sensor and Beclin-1 autophagy protein shapes innate antimicrobial immune responses, Cell Host Microbe, vol.15, pp.228-266, 2014.

C. S. Yang, M. Rodgers, and C. K. Min, The autophagy regulator Rubicon is a feedback inhibitor of CARD9mediated host innate immunity, Cell Host Microbe, vol.11, pp.277-89, 2012.

S. Paul, A. K. Kashyap, and W. Jia, Selective autophagy of the adaptor protein Bcl10 modulates T cell receptor activation of NF-kappaB, Immunity, vol.36, pp.947-58, 2012.

P. M. Fliss, T. P. Jowers, and M. M. Brinkmann, Viral mediated redirection of NEMO/IKKgamma to autophagosomes curtails the inflammatory cascade, PLoS Pathog, vol.8, p.1002517, 2012.

M. Inomata, S. Niida, K. Shibata, and T. Into, Regulation of Toll-like receptor signaling by NDP52-mediated selective autophagy is normally inactivated by A20, Cell Mol Life Sci, vol.69, pp.963-79, 2012.

J. R. Kovacs, C. Li, and Q. Yang, Autophagy promotes T-cell survival through degradation of proteins of the cell death machinery, Cell Death Differ, vol.19, pp.144-52, 2012.

B. C. Miller, Z. Zhao, and L. M. Stephenson, The autophagy gene ATG5 plays an essential role in B lymphocyte development, Autophagy, vol.4, pp.309-323, 2008.

V. M. Hubbard, R. Valdor, and B. Patel, Macroautophagy regulates energy metabolism during effector T cell activation, J Immunol, vol.185, pp.7349-57, 2010.

X. Xu, K. Araki, and S. Li, Autophagy is essential for effector CD8 + T cell survival and memory formation, Nat Immunol, vol.15, pp.1152-61, 2014.

N. Pengo, M. Scolari, and L. Oliva, Plasma cells require autophagy for sustainable immunoglobulin production, Nat Immunol, vol.14, pp.298-305, 2013.

M. Chen, M. J. Hong, and H. Sun, Essential role for autophagy in the maintenance of immunological memory against influenza infection, Nat Med, vol.20, pp.503-513, 2014.

A. Chaturvedi, D. Dorward, and S. K. Pierce, The B cell receptor governs the subcellular location of Toll-like receptor 9 leading to hyperresponses to DNA-containing antigens, Immunity, vol.28, pp.799-809, 2008.

J. Wei, L. Long, and K. Yang, Autophagy enforces functional integrity of regulatory T cells by coupling environmental cues and metabolic homeostasis, Nat Immunol, vol.17, pp.277-85, 2016.

R. Valdor, E. Mocholi, and Y. Botbol, Chaperone-mediated autophagy regulates T cell responses through targeted degradation of negative regulators of T cell activation, Nat Immunol, vol.15, pp.1046-54, 2014.